Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11869 Sterequinone D 304.1081 305.1127 117
P12646 Asparenomycin A 340.0761 341.0851 117
P15474 Methyl syramuraldehydate 242.0775 243.0847 117
P17333 1-(1-methylethenyl)-3-(1-methylethyl)-benzene 160.1239 161.1307 117
P17337 Glucoerysodine 461.2040 462.2094 117
P19729 4-Ethyl-2,5-dimethyloxazole 125.0846 126.0911 117
P19799 Galangin 5-methyl ether 284.0690 285.0768 117
P23548 (4E)-Undec-4-enoyl-CoA 933.2692 934.2742 117
P25862 Amocarzine 371.1445 372.1498 117
P28613 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2758 965.2795 117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G224300 hypothetical protein NA 123
Glyma.18G006800 hypothetical protein AT1G67370:ASY1:DNA-binding HORMA family protein 123
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 122
Glyma.10G264300 Mediator of RNA polymerase II transcription subunit 21 AT4G04780:MED21:mediator 21 122
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 122
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 122
Glyma.15G219200 hypothetical protein NA 122
Glyma.16G137000 hypothetical protein NA 122
Glyma.16G137100 hypothetical protein NA 122
Glyma.19G027700 hypothetical protein AT5G15440:EDL1:EID1-like 1 122