Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37898 Dechlorobarbamide 426.0942 427.1011 118
P42831 N-(33-(9Z,12Z-octadecadienoyloxy)-tritriacontanoyl)-heneicosasphinganine 1098.0490 1099.0581 118
P44498 PA(18:4(6Z,9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)-OH(19S)) 732.4399 733.4477 118
P46179 Kitamycin A 464.2157 465.2219 118
P46842 Aypgkf 681.3415 682.3472 118
P53532 Methyl 2,3-dihydro-3,5-dihydroxy-2-oxo-3-indoleacetic acid 237.0636 238.0716 118
P02113 1H-1,4-Diazepine, hexahydro-1-((5-iodo-1-naphthalenyl)sulfonyl)- 416.0121 417.0190 117
P04168 2-Nitrophenyl acetate 181.0357 182.0441 117
P05831 2-Methacryloyloxyethyl phosphorylcholine 295.1190 296.1230 117
P08297 Asparenomycin A 340.0759 341.0847 117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G224300 hypothetical protein NA 123
Glyma.18G006800 hypothetical protein AT1G67370:ASY1:DNA-binding HORMA family protein 123
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 122
Glyma.10G264300 Mediator of RNA polymerase II transcription subunit 21 AT4G04780:MED21:mediator 21 122
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 122
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 122
Glyma.15G219200 hypothetical protein NA 122
Glyma.16G137000 hypothetical protein NA 122
Glyma.16G137100 hypothetical protein NA 122
Glyma.19G027700 hypothetical protein AT5G15440:EDL1:EID1-like 1 122