Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11356 6-O-Acetylscutehenanine A 495.2297 496.2346 118
P14899 Mopidralazine 273.1588 274.1671 118
P15486 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1086 503.1184 118
P15867 Symlandine 381.2110 382.2174 118
P15915 Methionine sulfone 181.0438 182.0519 118
P17609 N,N-Didesmethyltramadol 235.1563 236.1631 118
P20973 SB 243213 428.1449 429.1530 118
P28706 Stemphyloxin I 382.2320 383.2393 118
P29385 Acarbose 645.2529 646.2627 118
P29481 TRIPARANOL 437.2060 438.2140 118

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G192000 hypothetical protein AT3G48430:REF6:relative of early flowering 6 124
Glyma.19G031100 hypothetical protein AT3G02170:LNG2:longifolia2 124
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 123
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 123
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 123
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 123
Glyma.08G142200 hypothetical protein NA 123
Glyma.11G105500 hypothetical protein AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 123
Glyma.13G149700 hypothetical protein AT3G10040:AT3G10040:sequence-specific DNA binding transcription factor 123
Glyma.13G183400 hypothetical protein NA 123