Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08554 Jasminoside A 330.1644 331.1724 127
P10082 Trifuhalol B 390.0587 391.0660 127
P10739 Antibiotic D 788-7 515.1878 516.1962 127
P10870 Isorhamnetin 3-sophoroside-7-glucoside 802.2147 803.2205 127
P12319 Didemethylcitalopram 296.1334 297.1412 127
P13946 Ethyl (E)-3-diethoxyphosphinothioyloxybut-2-enoate 282.0724 283.0815 127
P14285 Triethylene glycol dimethacrylate 286.1392 287.1451 127
P19144 4-Fluoro-1-[2-[(4-methyl-1-methylsulfonylpiperidin-4-yl)amino]acetyl]pyrrolidine-2-carbonitrile 346.1459 347.1558 127
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 965.2932 127
P21706 dTDP-4-hydroxyamino-4,6-dideoxy-alpha-D-glucose 563.1008 564.1089 127

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G192000 hypothetical protein AT3G48430:REF6:relative of early flowering 6 124
Glyma.19G031100 hypothetical protein AT3G02170:LNG2:longifolia2 124
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 123
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 123
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 123
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 123
Glyma.08G142200 hypothetical protein NA 123
Glyma.11G105500 hypothetical protein AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 123
Glyma.13G149700 hypothetical protein AT3G10040:AT3G10040:sequence-specific DNA binding transcription factor 123
Glyma.13G183400 hypothetical protein NA 123