Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P23907 968.2928 969.3031 132
P26825 850.3598 851.3632 132
P30950 14-Hydroxycathovaline 442.2134 443.2199 132
P33509 2-Hydroxy-6-oxo-6-(2-hydroxyphenoxy)-hexa-2,4-dienoate 250.0469 251.0549 132
P34626 Microtoenin C 941.5073 942.5094 132
P55525 271.1993 272.2052 132
P04118 9-Methoxy-7-phenyl-5H-furo[3,2-g][1]benzopyran-5-one 292.0726 293.0816 131
P06579 4-O-Methylascochlorin 418.1920 419.1981 131
P07063 Suffruticoside E 622.2095 623.2178 131
P08863 428.0566 429.0641 131

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G192000 hypothetical protein AT3G48430:REF6:relative of early flowering 6 124
Glyma.19G031100 hypothetical protein AT3G02170:LNG2:longifolia2 124
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 123
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 123
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 123
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 123
Glyma.08G142200 hypothetical protein NA 123
Glyma.11G105500 hypothetical protein AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 123
Glyma.13G149700 hypothetical protein AT3G10040:AT3G10040:sequence-specific DNA binding transcription factor 123
Glyma.13G183400 hypothetical protein NA 123