Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37253 913.9687 914.9746 146
P44756 Methyl (2E)-2-(10,13-dimethyl-11-oxo-3-pyrrolidin-1-yl-2,7,8,9,12,14,15,16-octahydro-1H-cyclopenta[a]phenanthren-17-ylidene)acetate 409.2568 410.2631 146
P07505 Benzamide, 5-((1,5-bis(4-methoxyphenyl)-1H-pyrazol-3-yl)dimethoxymethyl)-2-chloro- 507.1535 508.1626 145
P07895 Sporovexin C 309.1220 310.1320 145
P10934 Asperuloide C 602.2568 603.2623 145
P14156 Validamycin G 513.2050 514.2127 145
P16247 Petasiphyll A 650.2751 651.2810 145
P21485 Newbouldioside C 976.3055 977.3181 145
P32522 Almitrine 477.2433 478.2469 145
P35761 3,13-Di-O-beta-D-glucopyranosilgeranyllinalol 630.3675 631.3783 145

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G075500 hypothetical protein NA 126
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 126
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 126
Glyma.14G202500 hypothetical protein NA 126
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 126
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 126
Glyma.01G117000 hypothetical protein NA 125
Glyma.01G117200 hypothetical protein NA 125
Glyma.18G052100 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 125
Glyma.03G016900 hypothetical protein NA 124