Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55180 Haloxyline B 435.3680 436.3770 —
P55183 Ethyl (2S,3S)-3-[[(2S)-1-[[(2S)-1-hydroxypent-4-yn-2-yl]amino]-4-methyl-1-oxopentan-2-yl]carbamoyl]oxirane-2-carboxylate 354.1772 355.1835 —
P55184 Speciosin D 194.0581 195.0659 —
P55188 Prop-2-enylcyclohexane 124.1246 125.1317 —
P55189 15-Acetoxyverruculogen 569.2418 570.2499 —
P55191 609.0476 610.0568 —
P55194 Sarglaperoxide A 384.1932 385.2011 —
P55195 3-Hydroxy-p-mentha-1,8-dien-7-al 166.0982 167.1053 —
P55197 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2686 417.2763 —
P55198 775.2278 776.2313 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G075500 hypothetical protein NA 126
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 126
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 126
Glyma.14G202500 hypothetical protein NA 126
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 126
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 126
Glyma.01G117000 hypothetical protein NA 125
Glyma.01G117200 hypothetical protein NA 125
Glyma.18G052100 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 125
Glyma.03G016900 hypothetical protein NA 124