Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28501 433.2605 434.2679 177
P28558 400.6988 401.7068 177
P29734 Stemphyloxin I 382.2333 383.2392 177
P30823 181.0450 182.0523 177
P38200 4-(2-Chlorophenoxy)-N-[3-(methylcarbamoyl)phenyl]piperidine-1-carboxamide 387.1344 388.1406 177
P39722 Pellynol H 510.3657 511.3732 177
P43007 407.3600 408.3681 177
P43793 Acetyl-alpha-methylfentanyl 336.2200 337.2268 177
P45177 Fargoside D 778.4081 779.4154 177
P05243 5'-Deoxy-5'-fluoroadenosine 269.0921 270.0999 176

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G075500 hypothetical protein NA 126
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 126
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 126
Glyma.14G202500 hypothetical protein NA 126
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 126
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 126
Glyma.01G117000 hypothetical protein NA 125
Glyma.01G117200 hypothetical protein NA 125
Glyma.18G052100 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 125
Glyma.03G016900 hypothetical protein NA 124