Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06071 Proteacin 473.1514 474.1552 216
P23606 981.3248 982.3265 216
P25233 Ligujapone 202.1001 203.1075 216
P34921 Xyloccensin O 700.2387 701.2457 216
P52079 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1493 205.1577 216
P08763 831.2168 832.2238 215
P36727 Cyclopentenyl propionate musk 264.2057 265.2136 215
P40346 570.1408 571.1471 215
P48063 203.5863 204.5948 215
P52212 2-Chloro-N-icosa-5,8,11,14-tetraenylacetamide 365.2460 366.2546 215

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G075500 hypothetical protein NA 126
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 126
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 126
Glyma.14G202500 hypothetical protein NA 126
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 126
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 126
Glyma.01G117000 hypothetical protein NA 125
Glyma.01G117200 hypothetical protein NA 125
Glyma.18G052100 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 125
Glyma.03G016900 hypothetical protein NA 124