Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35928 Aloesone 7-O-glucoside 394.1231 395.1310 119
P36374 561.7929 562.7980 119
P37083 Sialyl-Le(a) oligosaccharide 1102.3780 1103.3803 119
P39162 FR 235222 556.3236 557.3294 119
P39954 852.2852 853.2931 119
P42881 Leupeptin 426.2931 427.3011 119
P43367 803.8936 804.9006 119
P43949 Serratezomine A 279.1813 280.1891 119
P44457 Montanastatin 740.4230 741.4366 119
P46832 dodecyl 2-methylpropanoate 256.2380 257.2448 119

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G075500 hypothetical protein NA 126
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 126
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 126
Glyma.14G202500 hypothetical protein NA 126
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 126
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 126
Glyma.01G117000 hypothetical protein NA 125
Glyma.01G117200 hypothetical protein NA 125
Glyma.18G052100 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 125
Glyma.03G016900 hypothetical protein NA 124