Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P00788	Tyrphostin B42	294.0991	295.1079	199
P07827		809.2516	810.2565	199
P14487	Yuzurimine E	429.2528	430.2610	199
P42503		121.9563	122.9631	199
P50354	Nodulisporic acid C2	701.4348	702.4409	199
P54402	Catuabine E	371.1815	372.1888	199
P26744	FR901537	507.1481	508.1541	198
P04642	Aminoacylase	536.2172	537.2249	197
P15145	Geodiamolide M	609.2125	610.2230	197
P33997		615.3757	616.3848	197

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.11G094700	hypothetical protein	AT5G08280:HEMC:hydroxymethylbilane synthase	129
Glyma.12G186300	hypothetical protein	NA	128
Glyma.01G099100	hypothetical protein	NA	127
Glyma.03G135600	hypothetical protein	NA	127
Glyma.06G129400	hypothetical protein	AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type	127
Glyma.09G075600	hypothetical protein	AT1G34630:AT1G34630:uncharacterized protein	127
Glyma.10G238700	hypothetical protein	NA	127
Glyma.10G239000	hypothetical protein	NA	127
Glyma.14G211800	hypothetical protein	AT1G66080:AT1G66080:hikeshi-like protein	127
Glyma.15G233600	hypothetical protein	NA	127