Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08612 Scrophuloside A7 752.2562 753.2657 161
P13827 (3-Nitrobenzoyl)alanine 238.0564 239.0640 161
P16053 Luteolin 7-galacturonide-4'-glucoside 624.1286 625.1388 161
P21570 (6E)-8-Oxogeraniol 168.1140 169.1209 161
P26728 1-nonen-3-one 140.1196 141.1267 161
P30204 Theasaponin C1 1174.5741 1175.5812 161
P36301 Dactylamide A 448.2163 449.2208 161
P46130 AMD 070 349.2298 350.2359 161
P50455 Carrageenan, potassium salt of 347.2545 348.2597 161
P11076 Amino leucine 146.1063 147.1143 160

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 132
Glyma.15G192900 hypothetical protein NA 132
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 132
Glyma.16G208100 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 132
Glyma.09G187600 hypothetical protein AT5G19460:NUDT20:nudix hydrolase homolog 20 131
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 131
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 131
Glyma.01G099900 hypothetical protein NA 130
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 130
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 129