Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31330 Arginine chloride 192.0780 193.0844 125
P42656 605.7500 606.7519 125
P44609 1-Acetoxy-3,15-epoxygymnomitrane 278.1877 279.1947 125
P47637 90.0461 91.0533 125
P47673 90.0465 91.0540 125
P48236 N-Palmitoyl Glutamic acid 385.2787 386.2871 125
P49106 Prodiamine 350.1210 351.1290 125
P50486 5-oxo-7-(S-glutathionyl)-8Z,11Z,14Z-eicosatrienoic acid 597.2751 598.2818 125
P53413 Tetradecyl nicotinate 319.2477 320.2545 125
P00779 2-Methylthio-N6-(delta2-isopentenyl)adenosine 381.1432 382.1491 124

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 132
Glyma.15G192900 hypothetical protein NA 132
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 132
Glyma.16G208100 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 132
Glyma.09G187600 hypothetical protein AT5G19460:NUDT20:nudix hydrolase homolog 20 131
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 131
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 131
Glyma.01G099900 hypothetical protein NA 130
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 130
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 129