Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54835 Prosulfuron 419.0794 420.0836 —
P54836 2-Ethyldihydro-3(2H)-thiophenone 130.0448 131.0520 —
P54839 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1079 245.2232 —
P54845 dehydro-beta-Ionone 190.1336 381.2740 —
P54848 311.3155 312.3223 —
P54853 607.7454 608.7564 —
P54854 605.8609 606.8659 —
P54856 5,6-Dichloro-1H-benzimidazole 185.9726 186.9795 —
P54857 606.6731 607.6849 —
P54859 N-(2-hydroxy-docosanoyl)-4E,6E-hexadecasphingadienine 607.5576 608.5640 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G149000 hypothetical protein NA 134
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 133
Glyma.08G184300 hypothetical protein NA 133
Glyma.12G202700 hypothetical protein AT2G20875:EPF1:epidermal patterning factor 1 133
Glyma.15G140700 hypothetical protein NA 133
Glyma.15G217100 hypothetical protein NA 133
Glyma.20G104900 hypothetical protein NA 133
Glyma.02G061700 hypothetical protein AT2G23450:AT2G23450:Protein kinase superfamily protein 132
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 132
Glyma.08G142400 WRKY6 WRKY transcription factor 6 NA 132