Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P05765	Lycomarasmine B	277.0881	278.0973	165
P12117	Nutlin-3	580.1626	581.1677	165
P18034		276.1936	277.2003	165
P21529	Hosloppin	392.0948	393.1016	165
P22253		360.2841	361.2899	165
P22299	Pubescenine	495.2821	496.2855	165
P29912	O-Phosphoviomycin	765.2905	766.2988	165
P42723	CJ 15208	577.2763	578.2781	165
P45180		199.1326	200.1399	165
P45663	Kopsaporine	426.1785	427.1816	165

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.14G149000		hypothetical protein	NA	134
Glyma.08G147500		hypothetical protein	AT3G18680:AT3G18680:Amino acid kinase family protein	133
Glyma.08G184300		hypothetical protein	NA	133
Glyma.12G202700		hypothetical protein	AT2G20875:EPF1:epidermal patterning factor 1	133
Glyma.15G140700		hypothetical protein	NA	133
Glyma.15G217100		hypothetical protein	NA	133
Glyma.20G104900		hypothetical protein	NA	133
Glyma.02G061700		hypothetical protein	AT2G23450:AT2G23450:Protein kinase superfamily protein	132
Glyma.03G145700		hypothetical protein	AT3G58030:AT3G58030:RING/U-box superfamily protein	132
Glyma.08G142400	WRKY6	WRKY transcription factor 6	NA	132