Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P05722 (-)-Echinobetaine A 175.1198 176.1263 111
P06706 Nitrazine 233.1234 234.1308 111
P06915 682.1883 683.1935 111
P08742 153.0759 154.0846 111
P09330 Aclatonium 217.1286 218.1356 111
P09922 Voxelotor 337.1410 338.1475 111
P11202 577.1808 578.1882 111
P11491 Kaempferol 7,4'-dimethyl ether 3-O-sulfate 394.0315 395.0366 111
P11603 HC 70III 455.2224 456.2292 111
P12384 2-(4-methoxyphenyl)ethanol 152.0846 153.0919 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G149000 hypothetical protein NA 134
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 133
Glyma.08G184300 hypothetical protein NA 133
Glyma.12G202700 hypothetical protein AT2G20875:EPF1:epidermal patterning factor 1 133
Glyma.15G140700 hypothetical protein NA 133
Glyma.15G217100 hypothetical protein NA 133
Glyma.20G104900 hypothetical protein NA 133
Glyma.02G061700 hypothetical protein AT2G23450:AT2G23450:Protein kinase superfamily protein 132
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 132
Glyma.08G142400 WRKY6 WRKY transcription factor 6 NA 132