Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P20244 (+)-Trehazolin 366.1291 367.1369 140
P22618 (Z)-3-Hexenyl 3-methylbutanoate 184.1453 185.1523 140
P26724 Arginylthreonine 275.1606 276.1676 140
P28637 630.7857 631.7925 140
P32826 Aszonalenin 373.1797 374.1870 140
P33750 6,8-Epoxy-p-menthane 154.1356 155.1413 140
P34054 Scandenolide 334.1041 335.1106 140
P35584 Maetenoside B 1202.5971 1203.6044 140
P44811 Fargoside D 778.4074 779.4157 140
P46204 SB 311009 408.2576 409.2666 140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 2,222
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2,180
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 2,080
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 2,080
Glyma.16G196900 hypothetical protein NA 2,052
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1,955
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1,948
Glyma.10G079800 hypothetical protein NA 1,939
Glyma.10G081200 hypothetical protein NA 1,939
Glyma.10G078700 hypothetical protein NA 1,935