Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45201 Reduced ketanserin 397.1809 398.1901 151
P46667 1558.8251 780.4180 151
P50770 195.5809 196.5888 151
P55369 Amprenavir 505.2250 506.2316 151
P04083 2-[(4-Phenoxyphenyl)sulfonylmethyl]thiirane 306.0384 307.0460 150
P04213 5,6-Dihydroxy-7,8,4'-trimethoxyflavanone 346.1039 347.1114 150
P06527 242.0408 243.0484 150
P06756 Sertraline 305.0731 306.0811 150
P08828 Thorectandramine 437.1702 438.1784 150
P09793 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1184 427.1241 150

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 2,222
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2,180
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 2,080
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 2,080
Glyma.16G196900 hypothetical protein NA 2,052
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1,955
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1,948
Glyma.10G079800 hypothetical protein NA 1,939
Glyma.10G081200 hypothetical protein NA 1,939
Glyma.10G078700 hypothetical protein NA 1,935