Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54719 188.9958 190.0025 102
P00511 4-Iodo-2,5-dimethoxyphenethylamine 307.0092 308.0168 101
P00815 N-Vinylpyrrolidine 97.0882 98.0959 101
P01795 benserazide 257.0969 258.1036 101
P02709 (4S)-4-Amino-5-[(2R)-2-amino-3-sulfanylpropanoyl]oxy-5-oxopentanoic acid 250.0620 251.0684 101
P02815 Macromomycin B 249.0683 250.0746 101
P05861 Ethenodeoxyadenosine 275.1027 276.1108 101
P08431 (6S)-6beta-Hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide phosphate 763.1053 764.1146 101
P09342 o-Methylacetophenone 134.0724 135.0792 101
P11522 4-Aminophenylacetic acid 151.0620 152.0691 101

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 2,222
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2,180
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 2,080
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 2,080
Glyma.16G196900 hypothetical protein NA 2,052
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1,955
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1,948
Glyma.10G079800 hypothetical protein NA 1,939
Glyma.10G081200 hypothetical protein NA 1,939
Glyma.10G078700 hypothetical protein NA 1,935