Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35059 Benzyl 3-methylbutanoate 192.1139 193.1206 105
P38578 3-Methyl-4-(2,6,6-trimethyl-2-cyclohexen-1-yl)-3-buten-2-one 206.1653 207.1725 105
P40007 Adhyperforin 550.3985 551.4057 105
P45054 1-(9Z-octadecenoyl)-2-(5-hydroxy-8-oxo-6E-octenoyl)-sn-glycero-3-phosphoserine 677.3491 678.3568 105
P45809 Allyl ether 98.0726 99.0796 105
P46936 1-(5Z,8Z,11Z,14Z,17Z-eicosapentaenoyl)-2-(6Z,9Z,12Z,15Z-octadecatetraenoyl)-glycero-3-phospho-(1'-myo-inositol) 876.4780 877.4907 105
P52816 Alloeremophilone 218.1652 219.1728 105
P54671 358.7361 359.7418 105
P01539 Clitidine 270.0864 271.0921 104
P05260 368.6111 369.6195 104

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 2,222
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2,180
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 2,080
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 2,080
Glyma.16G196900 hypothetical protein NA 2,052
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1,955
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1,948
Glyma.10G079800 hypothetical protein NA 1,939
Glyma.10G081200 hypothetical protein NA 1,939
Glyma.10G078700 hypothetical protein NA 1,935