Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54970 389.7484 390.7567 —
P54972 3-O-Methyltithonin 394.1983 395.2085 —
P54975 504.3587 505.3668 —
P54977 Norbixin 380.1978 381.2047 —
P54980 2-Nitrophenyl a-D-galactopyranoside 301.0744 302.0796 —
P54981 N-(11Z,14Z-eicosadienoyl)-ethanolamine 351.3110 352.3178 —
P54985 209.1111 210.1189 —
P54990 517.3724 518.3802 —
P54992 16-(3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-2E-hexadecenoic acid 400.2767 401.2836 —
P54993 Phenol, 2-(2H-benzotriazol-2-yl)-4,6-bis(1,1-dimethylpropyl)- 351.2316 352.2396 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G150300 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 138
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 138
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 138
Glyma.12G197600 hypothetical protein AT4G03210:XTH9:xyloglucan endotransglucosylase/hydrolase 9 137
Glyma.16G159100 hypothetical protein NA 137
Glyma.18G273000 hypothetical protein NA 137
Glyma.10G266400 hypothetical protein NA 136
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 136
Glyma.13G162300 hypothetical protein NA 135
Glyma.09G237900 hypothetical protein NA 134