Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54738 10-Deoxymethymycin 453.3008 454.3043 —
P54739 Dovyalicin F 407.2558 408.2643 —
P54740 679.4942 680.5028 —
P54743 1-(2-methoxy-docosanyl)-sn-glycero-3-phosphoserine 597.3933 598.3993 —
P54746 (7E)-(3S, 6RS)-6,19-epidioxy-24,24-difluoro-9,10-seco-5(10),7-cholestadiene-3,25-diol 468.3060 469.3176 —
P54747 CH-223191 333.1599 334.1666 —
P54748 (4Z)-3-Hydroxytetradec-4-enedioylcarnitine 415.2606 416.2681 —
P54749 Citronellate 170.1324 171.1389 —
P54752 Fusicogigantone B 304.2384 305.2466 —
P54753 Avicularin 434.0814 435.0900 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G150300 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 138
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 138
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 138
Glyma.12G197600 hypothetical protein AT4G03210:XTH9:xyloglucan endotransglucosylase/hydrolase 9 137
Glyma.16G159100 hypothetical protein NA 137
Glyma.18G273000 hypothetical protein NA 137
Glyma.10G266400 hypothetical protein NA 136
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 136
Glyma.13G162300 hypothetical protein NA 135
Glyma.09G237900 hypothetical protein NA 134