Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P20244	(+)-Trehazolin	366.1291	367.1369	140
P22618	(Z)-3-Hexenyl 3-methylbutanoate	184.1453	185.1523	140
P26724	Arginylthreonine	275.1606	276.1676	140
P28637		630.7857	631.7925	140
P32826	Aszonalenin	373.1797	374.1870	140
P33750	6,8-Epoxy-p-menthane	154.1356	155.1413	140
P34054	Scandenolide	334.1041	335.1106	140
P35584	Maetenoside B	1202.5971	1203.6044	140
P44811	Fargoside D	778.4074	779.4157	140
P46204	SB 311009	408.2576	409.2666	140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.01G022200	hypothetical protein	NA	143
Glyma.18G251000	hypothetical protein	NA	143
Glyma.04G190700	hypothetical protein	NA	142
Glyma.04G190800	hypothetical protein	AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2	142
Glyma.12G028800	hypothetical protein	AT1G50300:TAF15:TBP-associated factor 15	142
Glyma.16G041800	hypothetical protein	NA	142
Glyma.17G218400	hypothetical protein	NA	142
Glyma.03G223000	hypothetical protein	AT1G02500:SAM1:S-adenosylmethionine synthetase 1	141
Glyma.17G205900	hypothetical protein	NA	141
Glyma.17G206100	hypothetical protein	NA	141