Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P41898		546.7256	547.7355	141
P45366	Dechlorobarbamide	426.0934	427.1001	141
P48034	Halaminol B	199.1920	200.1999	141
P48323	1-Oleoylglycerophosphocholine	521.3420	522.3497	141
P54222		671.1509	672.1589	141
P05856	Midodrine	254.1227	255.1311	140
P07220	Polyanethole-sulfate	228.0448	229.0527	140
P07629		741.0583	742.0664	140
P10273	5-Imino-2-methyl-1-cyclopenten-1-ol	111.0682	112.0755	140
P20165	(+)-Cheimonophyllal	282.1437	283.1503	140

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.01G022200	hypothetical protein	NA	143
Glyma.18G251000	hypothetical protein	NA	143
Glyma.04G190700	hypothetical protein	NA	142
Glyma.04G190800	hypothetical protein	AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2	142
Glyma.12G028800	hypothetical protein	AT1G50300:TAF15:TBP-associated factor 15	142
Glyma.16G041800	hypothetical protein	NA	142
Glyma.17G218400	hypothetical protein	NA	142
Glyma.03G223000	hypothetical protein	AT1G02500:SAM1:S-adenosylmethionine synthetase 1	141
Glyma.17G205900	hypothetical protein	NA	141
Glyma.17G206100	hypothetical protein	NA	141