Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35704 Phenol, 2-(2H-benzotriazol-2-yl)-4,6-bis(1,1-dimethylpropyl)- 351.2332 352.2403 144
P55192 2-Hydroxy-24-keto-octacosanolide 452.3854 453.3951 144
P00964 Glutarimide 113.0469 227.1009 143
P11762 (S)-ATPA 228.1093 229.1177 143
P16245 173.1267 174.1346 143
P18452 409.1206 410.1280 143
P26523 3-(3,5-dihydroxyphenyl)-4-(2-{3-[6-hydroxy-3-(3-hydroxyphenyl)-2-phenyl-2,3-dihydro-1-benzofuran-4-yl]-2-phenyl-2,3-dihydro-1-benzofuran-5-yl}ethenyl)-2-(4-hydroxyphenyl)-2,3-dihydro-1-benzofuran-5,6-diol 874.2788 875.2828 143
P28153 Dehydroprotostemonine 415.2032 416.2104 143
P42603 463.1322 464.1409 143
P48055 1-hexadecyl-2-(9Z-nonadecenoyl)-glycero-3-phospho-(1'-sn-glycerol) 748.5600 749.5665 143

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G022200 hypothetical protein NA 143
Glyma.18G251000 hypothetical protein NA 143
Glyma.04G190700 hypothetical protein NA 142
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 142
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 142
Glyma.16G041800 hypothetical protein NA 142
Glyma.17G218400 hypothetical protein NA 142
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 141
Glyma.17G205900 hypothetical protein NA 141
Glyma.17G206100 hypothetical protein NA 141