Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13650 Dibalanocarpol 938.2662 939.2698 111
P14056 2-Oxo-8-methylthiooctanoic acid 204.0819 205.0892 111
P14846 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0667 136.0746 111
P16984 N-D-Glucosylarylamine 255.1088 256.1158 111
P17883 587.8008 588.8095 111
P18890 Rhamnetin 3-rhamnosyl-(1->3)(4'''-acetylrhamnosyl)(1->6)-galactoside 812.2394 813.2447 111
P20995 Renieramycin R 605.2442 606.2541 111
P25679 Citronellate 170.1291 171.1358 111
P27806 Fenoverine 459.1623 460.1680 111
P28252 Hypochoeroside K 398.2271 399.2333 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G022200 hypothetical protein NA 143
Glyma.18G251000 hypothetical protein NA 143
Glyma.04G190700 hypothetical protein NA 142
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 142
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 142
Glyma.16G041800 hypothetical protein NA 142
Glyma.17G218400 hypothetical protein NA 142
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 141
Glyma.17G205900 hypothetical protein NA 141
Glyma.17G206100 hypothetical protein NA 141