Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P32267	Doronine	459.1717	460.1801	117
P34358	Genistein 7-O-glucuronide	446.0862	447.0907	117
P36094	Meehanine H	825.4180	826.4273	117
P36808	Decarbamoylgonyautoxin III	352.0799	353.0857	117
P39528		498.7220	499.7296	117
P41207	Volasertib	618.4025	619.4131	117
P41909		97.5037	98.5109	117
P41950	5,6-Epoxyoctadeca-7,9-diynoic acid	290.1854	581.3797	117
P42108	alpha-Curcumene	202.1704	405.3482	117
P42124		987.5181	988.5281	117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.01G022200	hypothetical protein	NA	143
Glyma.18G251000	hypothetical protein	NA	143
Glyma.04G190700	hypothetical protein	NA	142
Glyma.04G190800	hypothetical protein	AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2	142
Glyma.12G028800	hypothetical protein	AT1G50300:TAF15:TBP-associated factor 15	142
Glyma.16G041800	hypothetical protein	NA	142
Glyma.17G218400	hypothetical protein	NA	142
Glyma.03G223000	hypothetical protein	AT1G02500:SAM1:S-adenosylmethionine synthetase 1	141
Glyma.17G205900	hypothetical protein	NA	141
Glyma.17G206100	hypothetical protein	NA	141