Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01325 7-Methoxymurrayacine 307.1223 308.1298 149
P07302 Melampyroside 450.1506 451.1589 149
P09071 888.1557 889.1645 149
P10311 2'-Cinnamoylsalicortin 554.1802 555.1831 149
P10689 1-(Pentafluorophenyl)propane 210.0480 211.0541 149
P14001 Quetiapine Sulfoxide 399.1540 400.1606 149
P16545 Sulfisomidine 278.0841 279.0918 149
P16940 5-Methylthiopentyldesulfoglucosinolate 355.1126 356.1217 149
P17252 Riddelliine N-oxide 365.1502 366.1570 149
P25789 10-Isovaleryl kanokoside C 722.3032 723.3071 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G081100 hypothetical protein NA 148
Glyma.15G049800 hypothetical protein NA 148
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 147
Glyma.13G204200 hypothetical protein NA 146
Glyma.19G128100 hypothetical protein NA 146
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 145
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 145
Glyma.02G138200 hypothetical protein NA 144
Glyma.01G021700 hypothetical protein NA 143
Glyma.01G022000 hypothetical protein NA 143