Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54970 389.7484 390.7567 —
P54972 3-O-Methyltithonin 394.1983 395.2085 —
P54975 504.3587 505.3668 —
P54977 Norbixin 380.1978 381.2047 —
P54980 2-Nitrophenyl a-D-galactopyranoside 301.0744 302.0796 —
P54981 N-(11Z,14Z-eicosadienoyl)-ethanolamine 351.3110 352.3178 —
P54985 209.1111 210.1189 —
P54990 517.3724 518.3802 —
P54992 16-(3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-2E-hexadecenoic acid 400.2767 401.2836 —
P54993 Phenol, 2-(2H-benzotriazol-2-yl)-4,6-bis(1,1-dimethylpropyl)- 351.2316 352.2396 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G081100 hypothetical protein NA 148
Glyma.15G049800 hypothetical protein NA 148
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 147
Glyma.13G204200 hypothetical protein NA 146
Glyma.19G128100 hypothetical protein NA 146
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 145
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 145
Glyma.02G138200 hypothetical protein NA 144
Glyma.01G021700 hypothetical protein NA 143
Glyma.01G022000 hypothetical protein NA 143