Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07122 p-Coumaroyl-malic acid 280.0568 281.0648 170
P15887 Tiagabine 375.1341 376.1391 170
P22733 9R-hydroxy-2S,8S-dimethyl-3-oxo-2E,4E-undecadienoic acid 240.1333 241.1401 170
P32315 839.3560 840.3653 170
P35427 690.1372 691.1470 170
P44438 Benzenepropanoic acid, 4-hydroxy-alpha-(2-((3-(hydroxyamino)-3-oxo-1-(phenylmethyl)propyl)amino)-2-oxoethyl)-3-iodo- 526.0601 527.0660 170
P49144 d-Phenylalanyl-l-prolyl-l-arginyl-chloromethyl ketone 926.4041 927.4114 170
P08848 594.1727 595.1810 169
P09434 2-(3,4-Dihydro-2,2-dimethyl-6-nitro-2H-1,4-benzoxazin-4-yl)pyridine N-oxide 301.1057 302.1136 169
P09532 Guangsangon M 610.1807 611.1855 169

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G081100 hypothetical protein NA 148
Glyma.15G049800 hypothetical protein NA 148
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 147
Glyma.13G204200 hypothetical protein NA 146
Glyma.19G128100 hypothetical protein NA 146
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 145
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 145
Glyma.02G138200 hypothetical protein NA 144
Glyma.01G021700 hypothetical protein NA 143
Glyma.01G022000 hypothetical protein NA 143