Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P05722	(-)-Echinobetaine A	175.1198	176.1263	111
P06706	Nitrazine	233.1234	234.1308	111
P06915		682.1883	683.1935	111
P08742		153.0759	154.0846	111
P09330	Aclatonium	217.1286	218.1356	111
P09922	Voxelotor	337.1410	338.1475	111
P11202		577.1808	578.1882	111
P11491	Kaempferol 7,4'-dimethyl ether 3-O-sulfate	394.0315	395.0366	111
P11603	HC 70III	455.2224	456.2292	111
P12384	2-(4-methoxyphenyl)ethanol	152.0846	153.0919	111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.13G081100	hypothetical protein	NA	148
Glyma.15G049800	hypothetical protein	NA	148
Glyma.06G085900	hypothetical protein	AT2G25830:AT2G25830:YebC-like protein	147
Glyma.13G204200	hypothetical protein	NA	146
Glyma.19G128100	hypothetical protein	NA	146
Glyma.18G236700	hypothetical protein	AT3G61490:AT3G61490:Pectin lyase-like superfamily protein	145
Glyma.20G098200	hypothetical protein	AT1G56345:AT1G56345:Pseudouridine synthase family protein	145
Glyma.02G138200	hypothetical protein	NA	144
Glyma.01G021700	hypothetical protein	NA	143
Glyma.01G022000	hypothetical protein	NA	143