Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01733 4'-N-desmethylolanzapine 298.1240 299.1299 124
P04560 17-dimethylarsinoyl-9Z-heptadecenoic acid 388.1968 389.1998 124
P05426 337.6692 338.6757 124
P10564 11-Isopropylcryptolepine 274.1514 275.1575 124
P11201 2-Methoxybenzoic acid 152.0461 153.0537 124
P11527 S-(2-Chloroethyl)glutathione 369.0774 370.0842 124
P14200 Edulisin V 428.1866 429.1918 124
P18929 Deptropine 333.2119 334.2186 124
P20132 Thymidine 3',5'-cyclic monophosphate 304.0457 305.0527 124
P23365 Desloratadine 310.1238 311.1277 124

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G081100 hypothetical protein NA 148
Glyma.15G049800 hypothetical protein NA 148
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 147
Glyma.13G204200 hypothetical protein NA 146
Glyma.19G128100 hypothetical protein NA 146
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 145
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 145
Glyma.02G138200 hypothetical protein NA 144
Glyma.01G021700 hypothetical protein NA 143
Glyma.01G022000 hypothetical protein NA 143