Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P38997 Xanthobaccin B 512.2927 513.3014 113
P39126 Fruticosonine 312.2196 313.2285 113
P40099 Alanylproline 186.1024 187.1107 113
P42277 2beta-Hydroxytestosterone 304.2005 305.2076 113
P46449 Rapisterone 508.3341 509.3406 113
P51427 11E,14E-Octadecadienal 264.2418 265.2500 113
P55331 Juncin H 642.2343 643.2410 113
P55588 Hanburinone 626.2685 627.2796 113
P02264 Succinic anhydride 100.0157 101.0225 112
P03530 Thiamin monophosphate 344.0706 345.0792 112

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G207900 hypothetical protein NA 148
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 148
Glyma.06G208900 hypothetical protein NA 148
Glyma.06G209400 hypothetical protein NA 148
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 148
Glyma.06G210000 hypothetical protein NA 148
Glyma.06G210100 hypothetical protein NA 148
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 148
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 148
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 148