Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22313 Terpendole J 521.3205 522.3302 119
P22424 Loperamide 476.2217 477.2266 119
P23487 Neoacrimarine-K 559.1779 560.1836 119
P25130 Hypodematine 247.0999 248.1073 119
P25637 trans-p-Ferulyl alcohol 4-O-[6-(2-methyl-3-hydroxypropionyl)] glucopyranoside 428.1667 857.3386 119
P26612 Pradimicin O 563.1473 564.1552 119
P31836 Ethambutol 204.1857 205.1933 119
P34760 Novapikromycin 541.3261 542.3342 119
P34767 (2S)-2-Cyclopentyl-2-[4-[(2,4-dimethylpyrido[2,3-b]indol-9-yl)methyl]phenyl]-N-[(1S)-2-hydroxy-1-phenylethyl]acetamide 531.2973 532.3058 119
P35028 PS(20:5(5Z,8Z,11Z,14Z,17Z)/18:4(6Z,9Z,12Z,15Z)) 801.4653 802.4685 119

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G207900 hypothetical protein NA 148
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 148
Glyma.06G208900 hypothetical protein NA 148
Glyma.06G209400 hypothetical protein NA 148
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 148
Glyma.06G210000 hypothetical protein NA 148
Glyma.06G210100 hypothetical protein NA 148
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 148
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 148
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 148