Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28918 Trienomycin E 610.3503 611.3588 126
P29106 PGP(PGE2/22:5(7Z,10Z,13Z,16Z,19Z)) 972.4792 973.4887 126
P29714 Saframycin C 567.2128 568.2235 126
P30517 Ethambutol 204.1848 205.1925 126
P33934 1-(1-Phenylcyclohexyl)-4-hydroxypiperidine 259.1929 260.1990 126
P34061 p-Formylbenzoic acid 150.0310 151.0378 126
P34329 Rhopaladin B 370.1112 371.1158 126
P34873 (R)-2-Methylimino-1-phenylpropan-1-ol 163.0982 164.1054 126
P35765 Foetidissimoside A 1058.5215 1059.5351 126
P42290 446.1690 447.1777 126

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G207900 hypothetical protein NA 148
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 148
Glyma.06G208900 hypothetical protein NA 148
Glyma.06G209400 hypothetical protein NA 148
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 148
Glyma.06G210000 hypothetical protein NA 148
Glyma.06G210100 hypothetical protein NA 148
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 148
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 148
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 148