Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54757 stigmast-5-en-3beta-yl (3E-pentenoate) 496.4182 497.4269 —
P54758 Ser-Leu-Ile-Gly-Lys-Val 615.4030 616.4081 —
P54762 Crambescin A 448.3499 449.3575 —
P54764 Sodwanone B 484.3229 485.3327 —
P54765 Limonenecarboxylic acid 180.1139 181.1211 —
P54766 Benzanthrin A 634.2907 635.2923 —
P54767 Viburtinal 160.0510 161.0590 —
P54768 Ajugapantin A 550.2417 551.2507 —
P54775 113.9490 114.9570 —
P54777 Sideretin 224.0327 225.0403 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G147500 hypothetical protein NA 152
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 151
Glyma.02G109400 hypothetical protein NA 150
Glyma.16G173000 hypothetical protein NA 150
Glyma.09G069400 hypothetical protein NA 149
Glyma.11G048600 hypothetical protein AT5G67470:FH6:formin homolog 6 149
Glyma.17G189300 hypothetical protein NA 149
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 148
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 148
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 148