Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P03825 1,2-(dioctanoyl)-sn-glycero-3-phospho-(1'- myo-inositol-4',5'-bisphosphate) 746.2092 747.2147 273
P11501 Tryptophyl-Alanine 275.1246 276.1320 272
P01578 3-Butene-1,2-diol 88.0524 89.0597 270
P14173 968.2652 969.2753 269
P14850 N-(E-4-coumaroyl)-aspartate 279.0736 280.0824 268
P23722 Echinacoside 786.2716 787.2782 266
P25270 (6E)-8-Oxogeraniol 168.1138 169.1208 266
P11169 Benthiavalicarb isopropyl 381.1532 382.1579 265
P19356 Terazosin 387.1942 388.2003 265
P30039 Tigloylseneganolide A 550.2618 551.2669 263

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G147500 hypothetical protein NA 152
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 151
Glyma.02G109400 hypothetical protein NA 150
Glyma.16G173000 hypothetical protein NA 150
Glyma.09G069400 hypothetical protein NA 149
Glyma.11G048600 hypothetical protein AT5G67470:FH6:formin homolog 6 149
Glyma.17G189300 hypothetical protein NA 149
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 148
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 148
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 148