Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13883 Kaempferol 3-O-caffeoyl-sophoroside 7-O-glucoside 934.2391 935.2481 158
P29430 Benzaldehyde 106.0416 107.0484 158
P41373 3-Benzoyloxy-6-oxo-12-ursen-28-oic acid 574.3653 575.3707 158
P45179 Spicataxine 669.3432 670.3494 158
P50043 2,5-Dimethylfuran 96.0579 97.0652 158
P05656 6,7-Dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine 289.1577 290.1655 157
P22528 Adiposin 2 661.2467 662.2558 157
P29660 Artemether 298.1742 299.1810 157
P34088 2'-O-(alpha-D-Manp)-6'-O-(alpha-D-Manp-1->6-alpha-D-Manp)-(1-heptadecanoyl-sn-glycero-3-phospho-1'-myo-inositol) 1072.4778 1073.4820 157
P36081 173.1252 174.1316 157

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 160
Glyma.18G220300 hypothetical protein NA 159
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 158
Glyma.09G269100 hypothetical protein NA 158
Glyma.11G241900 hypothetical protein NA 158
Glyma.02G107400 hypothetical protein NA 157
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 157
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 155
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 154
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 152