Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54723 108.0103 109.0175 —
P54725 dehydro-beta-Ionone 190.1356 191.1415 —
P54726 Austronine 619.2163 620.2249 —
P54729 TRI-O-CRESYL PHOSPHATE 368.1149 369.1221 —
P54730 1,2-di-(2E,4E-octadienoyl)-sn-glycero-3-phosphocholine 501.2500 502.2556 —
P54731 Austroinulin 322.2473 323.2552 —
P54733 230.8916 231.8991 —
P54734 436.0756 437.0861 —
P54735 Isopyruthaldine 768.3599 769.3663 —
P54737 N-Nitrosobis(2-hydroxypropyl)amine 162.1020 325.2113 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 160
Glyma.18G220300 hypothetical protein NA 159
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 158
Glyma.09G269100 hypothetical protein NA 158
Glyma.11G241900 hypothetical protein NA 158
Glyma.02G107400 hypothetical protein NA 157
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 157
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 155
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 154
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 152