Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26421 (4Z,7Z,10Z,13Z,16Z)-19,20-dihydroxydocosa-4,7,10,13,16-pentaenoyl-CoA 1111.3430 1112.3416 116
P26502 15-Deoxyoxalicine A 487.2389 488.2453 116
P30577 Adapalene 412.2048 413.2117 116
P31137 898.3643 899.3679 116
P37682 Plagiochin C 454.1805 455.1891 116
P37841 609.2627 610.2688 116
P43281 Glutamine glutamate aspartate 565.1540 566.1630 116
P43352 Antibiotic X 5108 810.4333 811.4436 116
P43742 Laetiposide D 646.4088 647.4189 116
P49257 PIP(18:3(10,12,15)-OH(9)/16:2(9Z,12Z)) 924.4415 925.4451 116

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 160
Glyma.18G220300 hypothetical protein NA 159
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 158
Glyma.09G269100 hypothetical protein NA 158
Glyma.11G241900 hypothetical protein NA 158
Glyma.02G107400 hypothetical protein NA 157
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 157
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 155
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 154
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 152