Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09081 623.2447 624.2476 126
P09944 Waltherione A 393.1580 394.1665 126
P10660 L-gamma-Glutamyl-S-allylthio-L-cysteine 322.0663 323.0728 126
P12516 Gallic acid 170.0196 171.0281 126
P13309 4-Phenethylphenol 198.1061 199.1131 126
P17776 2'-Dehydrokanamycin A 482.2226 483.2303 126
P20643 728.2711 729.2757 126
P26285 175.0710 176.0774 126
P27902 Acarbose 645.2547 646.2547 126
P28677 10-ethoxy-2methylene-10-oxodecanoic acid 242.1473 485.3054 126

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 160
Glyma.18G220300 hypothetical protein NA 159
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 158
Glyma.09G269100 hypothetical protein NA 158
Glyma.11G241900 hypothetical protein NA 158
Glyma.02G107400 hypothetical protein NA 157
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 157
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 155
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 154
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 152