Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55367 157.9660 158.9738 —
P55373 625.1241 626.1300 —
P55374 Pyridomacrolidin 581.2199 582.2304 —
P55377 607.8877 608.8918 —
P55379 Pre-alcaligin 422.2002 423.2039 —
P55381 Hydroxynybomycin 314.0896 315.0962 —
P55383 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1080 503.1150 —
P55387 257.9007 258.9083 —
P55389 (4R)-4-Hydroxyipecoside 581.2079 582.2145 —
P55390 Withaperuvin H 578.2554 579.2585 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G187900 hypothetical protein AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 163
Glyma.01G022300 hypothetical protein NA 162
Glyma.15G216700 hypothetical protein NA 162
Glyma.15G216900 hypothetical protein NA 162
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 161
Glyma.18G098900 hypothetical protein NA 161
Glyma.18G220200 hypothetical protein AT2G38650:GAUT7:galacturonosyltransferase 7 161
Glyma.03G046000 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein 160
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 160
Glyma.11G182800 hypothetical protein AT2G27460:AT2G27460:sec23/sec24 transport family protein 160