Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P05722 (-)-Echinobetaine A 175.1198 176.1263 111
P06706 Nitrazine 233.1234 234.1308 111
P06915 682.1883 683.1935 111
P08742 153.0759 154.0846 111
P09330 Aclatonium 217.1286 218.1356 111
P09922 Voxelotor 337.1410 338.1475 111
P11202 577.1808 578.1882 111
P11491 Kaempferol 7,4'-dimethyl ether 3-O-sulfate 394.0315 395.0366 111
P11603 HC 70III 455.2224 456.2292 111
P12384 2-(4-methoxyphenyl)ethanol 152.0846 153.0919 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G187900 hypothetical protein AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 163
Glyma.01G022300 hypothetical protein NA 162
Glyma.15G216700 hypothetical protein NA 162
Glyma.15G216900 hypothetical protein NA 162
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 161
Glyma.18G098900 hypothetical protein NA 161
Glyma.18G220200 hypothetical protein AT2G38650:GAUT7:galacturonosyltransferase 7 161
Glyma.03G046000 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein 160
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 160
Glyma.11G182800 hypothetical protein AT2G27460:AT2G27460:sec23/sec24 transport family protein 160