Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54994 487.3446 488.3495 —
P55002 Ripromycin 524.2860 525.2964 —
P55003 Gaudichaudiic acid C 592.2313 593.2400 —
P55005 16S-methyl-sphing-4-enine 313.2955 314.3020 —
P55006 Leucyl-3-epi-deoxynegamycin 345.2398 346.2468 —
P55011 Dehydroabietal 284.2130 285.2200 —
P55012 9R-hydroxy-2E,4E-decadienoic acid 184.1098 185.1166 —
P55015 Chokol F 240.1764 241.1830 —
P55018 286.2237 287.2321 —
P55020 Rosmarinine-2-acetate 395.1928 396.1994 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G194800 hypothetical protein AT2G36250:FTSZ2-1:Tubulin/FtsZ family protein 168
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 166
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 166
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 166
Glyma.06G131700 hypothetical protein NA 165
Glyma.06G132100 hypothetical protein NA 165
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 165
Glyma.07G075400 hypothetical protein NA 164
Glyma.02G188300 hypothetical protein NA 163
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 163