Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54738 10-Deoxymethymycin 453.3008 454.3043 —
P54739 Dovyalicin F 407.2558 408.2643 —
P54740 679.4942 680.5028 —
P54743 1-(2-methoxy-docosanyl)-sn-glycero-3-phosphoserine 597.3933 598.3993 —
P54746 (7E)-(3S, 6RS)-6,19-epidioxy-24,24-difluoro-9,10-seco-5(10),7-cholestadiene-3,25-diol 468.3060 469.3176 —
P54747 CH-223191 333.1599 334.1666 —
P54748 (4Z)-3-Hydroxytetradec-4-enedioylcarnitine 415.2606 416.2681 —
P54749 Citronellate 170.1324 171.1389 —
P54752 Fusicogigantone B 304.2384 305.2466 —
P54753 Avicularin 434.0814 435.0900 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G194800 hypothetical protein AT2G36250:FTSZ2-1:Tubulin/FtsZ family protein 168
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 166
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 166
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 166
Glyma.06G131700 hypothetical protein NA 165
Glyma.06G132100 hypothetical protein NA 165
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 165
Glyma.07G075400 hypothetical protein NA 164
Glyma.02G188300 hypothetical protein NA 163
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 163