Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P12304 Amrubicin 483.1476 484.1512 176
P17789 Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside) 872.2263 873.2325 176
P20561 669.1601 670.1662 176
P29540 Kadsuphilol L 606.2044 607.2073 176
P29563 Sulfocostunolide A 312.1036 313.1116 176
P29935 Acantrifoside A 942.5143 943.5248 176
P36283 Isopropyl dodecylfluorophosphonate 294.2113 295.2185 176
P38088 365.6483 366.6561 176
P00499 1-Pentanesulfonic acid 152.0504 153.0569 175
P32791 Tenuecyclamide A 460.0996 461.1056 175

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G194800 hypothetical protein AT2G36250:FTSZ2-1:Tubulin/FtsZ family protein 168
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 166
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 166
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 166
Glyma.06G131700 hypothetical protein NA 165
Glyma.06G132100 hypothetical protein NA 165
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 165
Glyma.07G075400 hypothetical protein NA 164
Glyma.02G188300 hypothetical protein NA 163
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 163