Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P33461 Lucitanib 443.1838 444.1886 154
P35128 N-Acetylsulfamethazine 320.0994 321.1047 154
P41375 207.1309 208.1388 154
P46482 N-Methoxy-1-vinyl-beta-carboline 224.0945 225.1011 154
P47118 3b,15b,17a-Trihydroxy-pregnenone 348.2285 349.2346 154
P00268 trans-4-Carboxymethylenebut-2-en-4-olide 140.0099 141.0172 153
P00726 Ovalitenin C 322.0797 323.0886 153
P04147 Rubomycin F 599.2034 600.2092 153
P12648 Losmapimod 383.2008 384.2088 153
P23946 Peyophorine 249.1325 250.1414 153

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 170
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 170
Glyma.14G198100 hypothetical protein NA 170
Glyma.15G107500 hypothetical protein NA 170
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 170
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 169
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 168
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 168
Glyma.19G194300 Dt1 AT5G03840:TFL1:PEBP (phosphatidylethanolamine-binding protein) family protein 168
Glyma.19G194500 hypothetical protein AT2G36270:ABI5:Basic-leucine zipper (bZIP) transcription factor family protein 168