Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00823 (-)-Mintlactone 306.0213 307.0281 164
P07492 Polypropylene glycol (m w 1,200-3,000) 134.0949 135.1012 164
P10281 Undeca-2,4,6-trienedioyl-CoA 959.2076 960.2157 164
P15662 513.2875 514.2951 164
P18935 Marchantin P 438.1840 439.1899 164
P22654 Excavatolide D 524.2197 525.2274 164
P32650 Thonzylamine 286.1756 287.1822 164
P34351 Arginylglutamine 302.1710 605.3489 164
P48467 13-Apo-beta-carotenone 258.1964 259.2031 164
P01110 (R)-11,12,13-Trinor-1(5),6,9-guaiatrien-8-one 174.1043 175.1111 163

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 170
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 170
Glyma.14G198100 hypothetical protein NA 170
Glyma.15G107500 hypothetical protein NA 170
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 170
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 169
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 168
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 168
Glyma.19G194300 Dt1 AT5G03840:TFL1:PEBP (phosphatidylethanolamine-binding protein) family protein 168
Glyma.19G194500 hypothetical protein AT2G36270:ABI5:Basic-leucine zipper (bZIP) transcription factor family protein 168