Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48148 N-(15Z-tetracosenoyl) taurine 473.3565 474.3625 110
P49298 Glycyltyrosine 238.0921 239.0980 110
P52035 cis-Communal 286.2267 287.2342 110
P54535 (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile 202.1223 203.1291 110
P00974 Sertraline 305.0751 306.0843 109
P04848 Nitrobenzene 123.0319 124.0390 109
P06573 7-Hydroxyfluphenazine 453.1741 454.1800 109
P08590 Aspartyl-Aspartate 248.0653 249.0725 109
P09565 Fendosal 381.1405 382.1481 109
P10671 Endothal-disodium 186.0520 187.0588 109

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 170
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 170
Glyma.14G198100 hypothetical protein NA 170
Glyma.15G107500 hypothetical protein NA 170
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 170
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 169
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 168
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 168
Glyma.19G194300 Dt1 AT5G03840:TFL1:PEBP (phosphatidylethanolamine-binding protein) family protein 168
Glyma.19G194500 hypothetical protein AT2G36270:ABI5:Basic-leucine zipper (bZIP) transcription factor family protein 168