Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35545 616.8018 617.8091 123
P36889 Cyanazine 240.0879 241.0955 123
P37209 2,3-di-O-hexanoyl-alpha-glucopyranose 376.2115 377.2181 123
P37987 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1463 811.4444 123
P41869 Scutebarbatine H 469.2026 470.2090 123
P43011 1080.0249 1081.0336 123
P43202 3R-undecanoyloxy-2R-hydroxy-4-methylpentanoic acid methyl ester 330.2375 331.2444 123
P46986 Butyl oleate sulfate 434.2692 435.2782 123
P48228 Valerylfentanyl 364.2459 365.2510 123
P03650 4-Sinapoylquinic acid 398.1211 399.1261 122

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 170
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 170
Glyma.14G198100 hypothetical protein NA 170
Glyma.15G107500 hypothetical protein NA 170
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 170
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 169
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 168
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 168
Glyma.19G194300 Dt1 AT5G03840:TFL1:PEBP (phosphatidylethanolamine-binding protein) family protein 168
Glyma.19G194500 hypothetical protein AT2G36270:ABI5:Basic-leucine zipper (bZIP) transcription factor family protein 168